What are the key laboratory tests to consider when evaluating a patient with suspected autoimmune disease?

Guideline-aligned answer with reasoning, red flags and references. Clinically reviewed by Dr Kola Tytler MBBS CertHE MBA MRCGP.

Posted: 17 August 2025 Guideline-Aligned (High Confidence) Clinically Reviewed
Dr Kola Tytler MBBS CertHE MBA MRCGPClinical Lead • iatroX

When evaluating a patient with suspected autoimmune disease, the key laboratory tests to consider are highly dependent on the specific condition suspected ,,. For instance, in cases where Systemic Lupus Erythematosus (SLE) is suspected, the evaluation of anti-dsDNA antibodies is a key consideration . However, it is important to note that some autoimmune diseases can be seronegative, meaning typical autoantibodies may not be present, posing a diagnostic challenge .

For suspected coeliac disease, initial tests typically include tissue transglutaminase (tTG) antibodies, and if these are positive, endomysial antibodies (EMA) may also be considered ,. In the context of suspected type 1 diabetes, relevant autoantibodies include islet cell antibodies (ICA), glutamic acid decarboxylase (GAD) antibodies, insulin autoantibodies (IAA), and tyrosine phosphatase-like antigen (IA-2) antibodies ,. The absence of typical serological markers does not always rule out an autoimmune condition, especially in the case of seronegative autoimmune diseases .

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